BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016A09LP1|AL426944
(943 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1641 1468 0.0
3x_Contig702 309 5e-84
>3x_Contig1641
Length = 13261
Score = 1468 bits (740), Expect = 0.0
Identities = 746/748 (99%)
Strand = Plus / Plus
Query: 1 gatcattcaatggctttgcaaaaccttggtctggcgatgaggataagttgttggtagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12514 gatcattcaatggctttgcaaaaccttggtctggcgatgaggataagttgttggtagaaa 12573
Query: 61 aacgtcaaaggtaccacttgtccattgatgagctttcaatcttgttacctcatagatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12574 aacgtcaaaggtaccacttgtccattgatgagctttcaatcttgttacctcatagatcag 12633
Query: 121 aacaagagatccaatggagaatggattcgttacatataacgcctagcgatgcagttagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12634 aacaagagatccaatggagaatggattcgttacatataacgcctagcgatgcagttagta 12693
Query: 181 ctgctagtccttccgccaatgttaatcaatcgagttcttcagatgaggtccactctactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12694 ctgctagtccttccgccaatgttaatcaatcgagttcttcagatgaggtccactctactt 12753
Query: 241 actcaccagatactgccgtagaggagcatgacgacattgacgatgttgatgttgatgtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12754 actcaccagatactgccgtagaggagcatgacgacattgacgatgttgatgttgatgtag 12813
Query: 301 agattgttggccgcatggaagactctattgccccaactcagctaagagatgaatctccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12814 agattgttggccgcatggaagactctattgccccaactcagctaagagatgaatctccta 12873
Query: 361 cgttttctcaaacatcttcgactggttcttccgctcgtgagagatcgccagtgttttcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12874 cgttttctcaaacatcttcgactggttcttccgctcgtgagagatcgccagtgttttcac 12933
Query: 421 cggacgctcattccttgagagaccattctccaactatttctgatgtgaacaactcatctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12934 cggacgctcattccttgagagaccattctccaactatttctgatgtgaacaactcatctt 12993
Query: 481 tttatggcaataggatgcctgccagcgtaccgaagcaaattcttcaaacacaggctagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12994 tttatggcaataggatgcctgccagcgtaccgaagcaaattcttcaaacacaggctagta 13053
Query: 541 atgaacaaacgccccagttcactccgaattcatcgcaatctcctcaaccaccacaaaacc 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 13054 atgaacaaacgccccagttcactccgaattcatcgcaatctcctgaaccaccacataacc 13113
Query: 601 atcgactaccgcaagtgccaactcagccactgcctagtttgaatacgatattcaagcaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13114 atcgactaccgcaagtgccaactcagccactgcctagtttgaatacgatattcaagcaca 13173
Query: 661 ttgtttgatgataaactgtctgtattaataccattatcaagaaccaaaaacttaaaaaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13174 ttgtttgatgataaactgtctgtattaataccattatcaagaaccaaaaacttaaaaaac 13233
Query: 721 tactttacaaaccactttcagacatgta 748
||||||||||||||||||||||||||||
Sbjct: 13234 tactttacaaaccactttcagacatgta 13261
>3x_Contig702
Length = 2831
Score = 309 bits (156), Expect = 5e-84
Identities = 163/164 (99%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 775 ggcgccagtcgctgctacttcaatcatcattgtcgttgatttactatcacataaacgcac 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2831 ggcgccagtcgctgctacttcaatcatcattgtcgttgatttactatcacataaacgcac 2772
Query: 835 acactttcctgattatgaccc-attgtacaagtactataactacaatagaacatcaataa 893
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2771 acactttcctgattatgaccccattgtacaagtactataactacaatagaacatcaataa 2712
Query: 894 tactgttacagtgttatctttatgccaaatcatttgaactgtac 937
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2711 tactgttacagtgttatctttatgccaaatcatttgaactgtac 2668
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6364
Number of Sequences: 1807
Number of extensions: 6364
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 2
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)